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Unknown,Transcriptomics,Genomics,Proteomics

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Transcription profiling of mouse for potential detrimental effects of a phytoestrogen-rich diet on male fertility

ABSTRACT: The goal of this experiment is to assess through toxicogenomic analyses the transcriptional changes induced by dietary phytoestrogens on the fetal testis during gestational exposure.

ORGANISM(S): Mus musculus

SUBMITTER: Serge Nef

PROVIDER: E-TABM-769 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Transcription profiling of S. cerevisiae (budding yeast) ume6 deletion strains vs wild-type in different media to determine the complement of Ume6 dependent genes during mitosis and meiosis

Project description:To determine the complement of Ume6-dependent genes expressed during mitosis and/or meiosis in budding yeast we compared wild-type and<br>ume6 deletion strains using Yeast 2.0 high density oligonucleotide microarrays (GeneChips). Samples were analysed from cells growing in rich medium with fermentable (glucose) and non-fermentable (acetate) carbon sources and from cells undergoing meiosis and spore formation in sporulation medium. Expression data were combined with data from a genome-wide Ume6 DNA binding assay and Ume6-target site prediction to identify the most likely direct target genes of Ume6.

2014-10-01 | E-TABM-192 | biostudies-arrayexpress

John Cobb 2006

Project description:The goal of the experiment was to identify genes downstream of the SHOX2 transcription factor during mouse forelimb development. Triplicate Samples were isolated from Shox2 mutants and wildtype/heterozygote limbs at E10.5 and E11.5.

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Transcription profiling of wild type and Sox9 knock out mice to study the role of Sox 9 (testis determining gene) after testis induction

Project description:To study the role of the testis determining gene Sox9 after testis induction, conditional inactivation of Sox9 was achieved with the help of an AMH-Cre line. Mutant mice are fertile up to about 3 months of age, becoming sterile afterwards. Expression profiles should help to reveal the underlying cause.

2010-07-01 | E-TABM-528 | biostudies-arrayexpress

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2008-06-11 | E-TABM-234 | biostudies-arrayexpress

Transcription profiling of mice mutant for Sox8 and Sox9 has early testicular sterility

Project description:To study a possible redundant role of mouse Sox8 and Sox9 after testis induction we generated double mutants by AMH-Cre conditional inactivation of Sox9 in a Sox8-/- background. Double mutants arrest spermatogenesis in early pubescence. We performed expression profiling to explore causes. AMH-Cre/+;Sox9flox/flox;Sox8-/- is a conditional homozygous knockout of SOX9 in a sox8-/- background, using an AMH-CRE line where the CRE recombinase is expressed under the promoter region of the human AMH gene in Sertoli cells starting at E13.5. The specific cross was between males of the genotype +/+;Sox9flox/flox;Sox8-/- and females of the genotype AMH-Cre/+;Sox9flox/flox;Sox8+/-.

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Transcription profiling by array of Arabidopsis mutant for gia3

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Transcription profiling of wild type and delta-sba1 yeast treated with radicicol to study gene regulation by sba1

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2010-06-22 | E-TABM-726 | biostudies-arrayexpress

Transcription profiling of chicken whole eye and retinal ganglion cells (RGC) to identify RGC-specific genes

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