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Femtosecond X-ray protein nanocrystallography.


ABSTRACT: X-ray crystallography provides the vast majority of macromolecular structures, but the success of the method relies on growing crystals of sufficient size. In conventional measurements, the necessary increase in X-ray dose to record data from crystals that are too small leads to extensive damage before a diffraction signal can be recorded. It is particularly challenging to obtain large, well-diffracting crystals of membrane proteins, for which fewer than 300 unique structures have been determined despite their importance in all living cells. Here we present a method for structure determination where single-crystal X-ray diffraction 'snapshots' are collected from a fully hydrated stream of nanocrystals using femtosecond pulses from a hard-X-ray free-electron laser, the Linac Coherent Light Source. We prove this concept with nanocrystals of photosystem I, one of the largest membrane protein complexes. More than 3,000,000 diffraction patterns were collected in this study, and a three-dimensional data set was assembled from individual photosystem I nanocrystals (?200?nm to 2??m in size). We mitigate the problem of radiation damage in crystallography by using pulses briefer than the timescale of most damage processes. This offers a new approach to structure determination of macromolecules that do not yield crystals of sufficient size for studies using conventional radiation sources or are particularly sensitive to radiation damage.

SUBMITTER: Chapman HN 

PROVIDER: S-EPMC3429598 | biostudies-literature | 2011 Feb

REPOSITORIES: biostudies-literature

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Femtosecond X-ray protein nanocrystallography.

Chapman Henry N HN   Fromme Petra P   Barty Anton A   White Thomas A TA   Kirian Richard A RA   Aquila Andrew A   Hunter Mark S MS   Schulz Joachim J   DePonte Daniel P DP   Weierstall Uwe U   Doak R Bruce RB   Maia Filipe R N C FR   Martin Andrew V AV   Schlichting Ilme I   Lomb Lukas L   Coppola Nicola N   Shoeman Robert L RL   Epp Sascha W SW   Hartmann Robert R   Rolles Daniel D   Rudenko Artem A   Foucar Lutz L   Kimmel Nils N   Weidenspointner Georg G   Holl Peter P   Liang Mengning M   Barthelmess Miriam M   Caleman Carl C   Boutet Sébastien S   Bogan Michael J MJ   Krzywinski Jacek J   Bostedt Christoph C   Bajt Saša S   Gumprecht Lars L   Rudek Benedikt B   Erk Benjamin B   Schmidt Carlo C   Hömke André A   Reich Christian C   Pietschner Daniel D   Strüder Lothar L   Hauser Günter G   Gorke Hubert H   Ullrich Joachim J   Herrmann Sven S   Schaller Gerhard G   Schopper Florian F   Soltau Heike H   Kühnel Kai-Uwe KU   Messerschmidt Marc M   Bozek John D JD   Hau-Riege Stefan P SP   Frank Matthias M   Hampton Christina Y CY   Sierra Raymond G RG   Starodub Dmitri D   Williams Garth J GJ   Hajdu Janos J   Timneanu Nicusor N   Seibert M Marvin MM   Andreasson Jakob J   Rocker Andrea A   Jönsson Olof O   Svenda Martin M   Stern Stephan S   Nass Karol K   Andritschke Robert R   Schröter Claus-Dieter CD   Krasniqi Faton F   Bott Mario M   Schmidt Kevin E KE   Wang Xiaoyu X   Grotjohann Ingo I   Holton James M JM   Barends Thomas R M TR   Neutze Richard R   Marchesini Stefano S   Fromme Raimund R   Schorb Sebastian S   Rupp Daniela D   Adolph Marcus M   Gorkhover Tais T   Andersson Inger I   Hirsemann Helmut H   Potdevin Guillaume G   Graafsma Heinz H   Nilsson Björn B   Spence John C H JC  

Nature 20110201 7332


X-ray crystallography provides the vast majority of macromolecular structures, but the success of the method relies on growing crystals of sufficient size. In conventional measurements, the necessary increase in X-ray dose to record data from crystals that are too small leads to extensive damage before a diffraction signal can be recorded. It is particularly challenging to obtain large, well-diffracting crystals of membrane proteins, for which fewer than 300 unique structures have been determine  ...[more]

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