Proteomics

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Similar is not the same: Differences in the function of the (hemi-)cellulolytic regulator XlnR (Xlr1/Xyr1) in filamentous fungi


ABSTRACT: The transcriptional activator XlnR (Xlr1/Xyr1) is a major regulator in fungal xylan and cellulose degradation as well as in the utilization of d-xylose via the pentose catabolic pathway. XlnR homologs are commonly found in filamentous ascomycetes and often assumed to have the same function in different fungi. However, a comparison of the saprobe Aspergillus niger and the plant pathogen Magnaporthe oryzae showed different phenotypes for deletion strains of XlnR. In this study wild type and xlnR/xlr1/xyr1 mutants of five fungi were compared: Fusarium graminearum, M. oryzae, Trichoderma reesei, A. niger and Aspergillus nidulans. Growth profiling on relevant substrates and a detailed analysis of the secretome as well as extracellular enzyme activities demonstrated a common role of this regulator in activating genes encoding the main xylanolytic enzymes. However, large differences were found in the set of genes that is controlled by XlnR in the different species, resulting in the production of different extracellular enzyme spectra by these fungi. This comparison emphasizes the functional diversity of a fine-tuned (hemi-)cellulolytic regulatory system in filamentous fungi, which might be related to the adaptation of fungi to their specific biotopes.

INSTRUMENT(S): LTQ Orbitrap Elite

ORGANISM(S): Magnaporthe Oryzae B157 Fusarium Graminearum Gz3639 Trichoderma Reesei Qm9414 Aspergillus Nidulans Tn02a3 Aspergillus Niger

SUBMITTER: Harm Post  

LAB HEAD: Ronald Peter de Vries

PROVIDER: PXD001190 | Pride | 2014-08-01

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
A_nidulans_1.pep.xml Pepxml
A_nidulans_2.pep.xml Pepxml
A_nidulans_d1.pep.xml Pepxml
A_nidulans_d2.pep.xml Pepxml
A_niger_1.pep.xml Pepxml
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Publications

Similar is not the same: differences in the function of the (hemi-)cellulolytic regulator XlnR (Xlr1/Xyr1) in filamentous fungi.

Klaubauf Sylvia S   Narang Hari Mander HM   Post Harm H   Zhou Miaomiao M   Brunner Kurt K   Mach-Aigner Astrid R AR   Mach Robert L RL   Heck Albert J R AJR   Altelaar A F Maarten AFM   de Vries Ronald P RP  

Fungal genetics and biology : FG & B 20140723


The transcriptional activator XlnR (Xlr1/Xyr1) is a major regulator in fungal xylan and cellulose degradation as well as in the utilization of d-xylose via the pentose catabolic pathway. XlnR homologs are commonly found in filamentous ascomycetes and often assumed to have the same function in different fungi. However, a comparison of the saprobe Aspergillus niger and the plant pathogen Magnaporthe oryzae showed different phenotypes for deletion strains of XlnR. In this study wild type and xlnR/x  ...[more]

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