Proteomics

Dataset Information

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SWATH-proteomics analysis of ibrutinib mechanism of action in neutropenia and acute myeloid leukemia initiating mutated granulocyte-colony stimulating factor receptor


ABSTRACT: Neutrophil production and function are primarily determined by granulocyte colony stimulating factor receptor (G-CSFR). G-CSFRs associated mutations (mostly localized in the transmembrane and cytoplasmic domains of the receptor) have been reported with several distinct hematological abnormalities as well as malignancies, e.g. severe congenital neutropenia (SCN), acute myeloid leukemia (AML) and chronic neutrophilic leukemia (CNL). Ibrutinib, a small molecule Bruton’s tyrosine kinase (BTK) inhibitor, is FDA approved and clinically used against B-cell related leukemia. In our previous published work (Dwivedi et al., Leukemia.2019;33:75–87), we have shown ibrutinib’s efficacy in the mutated G-CSFRs based leukemia model systems (mouse and human). However, the signaling mechanism of ibrutinib’s efficacy is not explored yet. Here, we present a unique SWATH-based label free quantitative proteomics analysis of the normal and mutated G-CSFRs signaling post ibrutinib treatment, using 32D cell-line-based in vitro model system.

INSTRUMENT(S): TripleTOF 5600

ORGANISM(S): Mus Musculus (mouse)

TISSUE(S): Bone Marrow, Bone Marrow Cell

DISEASE(S): Acute Leukemia

SUBMITTER: Somchai Chutipongtanate  

LAB HEAD: Kenneth D. Greis

PROVIDER: PXD013402 | Pride | 2020-04-27

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
12DDAs.zip Other
12DDAs_for_library_generation.group Other
12DDAs_proteinpilot_search_result_with_fdr.xlsx Xlsx
12DIAs.zip Other
curate_spectral_lib.txt Txt
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Publications

SWATH-Proteomics of Ibrutinib's Action in Myeloid Leukemia Initiating Mutated G-CSFR Signaling.

Dwivedi Pankaj P   Chutipongtanate Somchai S   Muench David E DE   Azam Mohammad M   Grimes Harry Leighton HL   Greis Kenneth D KD  

Proteomics. Clinical applications 20200525 5


<h4>Purpose</h4>To evaluate cellular protein changes in response to treatment with an approved drug, ibrutinib, in cells expressing normal or mutated granulocyte-colony stimulating factor receptor (G-CSFR). G-CSFR mutations are associated with some hematological malignancies. Previous studies show the efficacy of ibrutinib (a Bruton's tyrosine kinase inhibitor) in mutated G-CSFR leukemia models but do not address broader signaling mechanisms.<h4>Experimental design</h4>A label-free quantitative  ...[more]

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