Proteomics

Dataset Information

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Forensic proteomics to identify an unknown snake venom in blood


ABSTRACT: Although forensic proteomics is an emerging field, it remains underutilized as a tool for criminal investigations. Here we present its use in providing key evidence in an involuntary manslaughter case. The defendant was known to be a keeper of exotic snakes, including several venomous species, which led to a probe of potential snake venom components in the blood of the deceased. One major challenge of the investigation was the overwhelming presence of several blood proteins, such as albumin and immunoglobulins, which obscures the detection of less abundant ones. To mitigate this problem, proteins from the blood were processed in four different ways involving a combination of immunodepletion and fractionation methods, then prepared for peptide identification by mass spectrometry. We were able to sequence ~15,000 peptides, but another challenge was to differentiate between human and snake proteins, given the genetic similarities that are shared by the two species. After a thorough bioinformatics search and manual inspection, we found that <1% of the sequenced peptides were matched unequivocally to snake proteins, including a well-known venom component, phospholipase A2. This led to a court-issued search warrant of the defendant’s home, followed by his arrest and an eventual guilty plea with formal sentencing to 18 months in prison. The work outlined here is an example of proteomics technology that can help to expand the scope of forensic genetics.

INSTRUMENT(S): impact II

ORGANISM(S): Homo Sapiens (human) Serpentes

TISSUE(S): Blood

SUBMITTER: Queenie Chan  

LAB HEAD: Leonard James Foster

PROVIDER: PXD020203 | Pride | 2022-01-24

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
DepInGel_msms.txt Txt
DepInGel_peptides.txt Txt
DepInGel_proteinGroups.txt Txt
DepbRP_msms.txt Txt
DepbRP_peptides.txt Txt
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Publications

The application of forensic proteomics to identify an unknown snake venom in a deceased toddler.

Chan Queenie W T QWT   Rogalski Jason J   Moon Kyung-Mee KM   Foster Leonard J LJ  

Forensic science international 20210504


Proteomics is the global analysis of proteins in a sample, and its methodologies are commonly applied in life science research. Despite its wide applicability however, proteomics is rarely used as a tool in criminal investigations. Here we present a case where the technique provided key evidence in a case that involved the death of a two-year old girl. The defendant was known to keep exotic snakes, including several venomous species, which led the coroner to probe whether there could be snake ve  ...[more]

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