Proteomics

Dataset Information

0

Formation and persistence of polyglutamine aggregates in mistranslating cells


ABSTRACT: In neurodegenerative diseases, including pathologies with well-known causative alleles, genetic factors that modify severity or age of onset are not entirely understood. We recently documented the unexpected prevalence of transfer RNA (tRNA) mutants in the human population, including variants that cause amino acid mis-incorporation. We hypothesized that a mistranslating tRNA will exacerbate toxicity and modify the molecular pathology of disease-causing alleles and investigated the combinatorial effects of tRNA variants in cellular models of Huntington’s disease. This dataset represents MS/MS data confirming Phenylaline to Serine amino acid misincorporation events caused by the tRNA-Ser G35A variant described in our study. The wildtype (WT) or mistranslating tRNA (VAR) were expressed in murine N2a cells along with mCherry protein. We affinity purified the mCherry protein to search for Ser misincorporation events at Phe codons.

INSTRUMENT(S): Q Exactive HF

ORGANISM(S): Mus Musculus (mouse)

TISSUE(S): Cell Culture

DISEASE(S): Neuroblastoma

SUBMITTER: Jeremy Lant  

LAB HEAD: Patrick O'Donoghue

PROVIDER: PXD027837 | Pride | 2022-02-17

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
FASTA_mCherry_Phe_to_Ser_predictions__common_contaminants.fasta Fasta
RAW_variant_tRNA-Ser-AAA__mCherry.raw Raw
RAW_wt_tRNA-Ser-AGA__mCherry.raw Raw
checksum.txt Txt
peptides_1_1_0.mzid.gz Mzid
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Publications

Formation and persistence of polyglutamine aggregates in mistranslating cells.

Lant Jeremy T JT   Kiri Rashmi R   Duennwald Martin L ML   O'Donoghue Patrick P  

Nucleic acids research 20211101 20


In neurodegenerative diseases, including pathologies with well-known causative alleles, genetic factors that modify severity or age of onset are not entirely understood. We recently documented the unexpected prevalence of transfer RNA (tRNA) mutants in the human population, including variants that cause amino acid mis-incorporation. We hypothesized that a mistranslating tRNA will exacerbate toxicity and modify the molecular pathology of Huntington's disease-causing alleles. We characterized a tR  ...[more]

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