Proteomics

Dataset Information

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Identification of a novel protein circINSIG1-121 in hunan colorectal cancer cell by LC-MS


ABSTRACT: To identify a novel protein circINSIG1-121, we extracted the proteins from HCT8 cells, and then the proteins were subjected to mass spectrometry

INSTRUMENT(S): LTQ

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Colon

DISEASE(S): Colon Cancer

SUBMITTER: Zhenxing Liang  

LAB HEAD: Li Xiong

PROVIDER: PXD037292 | Pride | 2023-05-10

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
F003380.csv Csv
LZX.mgf Mgf
LZX.raw Raw
lzx_202109.fasta Fasta
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Publications

A novel protein encoded by circINSIG1 reprograms cholesterol metabolism by promoting the ubiquitin-dependent degradation of INSIG1 in colorectal cancer.

Xiong Li L   Liu Hua-Shan HS   Zhou Chi C   Yang Xin X   Huang Liang L   Jie Hai-Qing HQ   Zeng Zi-Wei ZW   Zheng Xiao-Bin XB   Li Wen-Xin WX   Liu Zhan-Zhen ZZ   Kang Liang L   Liang Zhen-Xing ZX  

Molecular cancer 20230422 1


<h4>Background</h4>Hypoxia is a hallmark of solid tumors and leads to the metabolic reprogramming of cancer cells. The role of epigenetic regulation between hypoxia and aberrant cholesterol metabolism in colorectal cancer (CRC) remains elusive.<h4>Methods</h4>Hypoxia-responsive circular RNAs (circRNAs) were identified by high throughput RNA sequencing between CRC cells cultured under normoxia or hypoxia. The protein-coding potential of circINSIG1 was identified by polysome profiling and LC-MS. T  ...[more]

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