Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Saccharomyces cerevisiae

ABSTRACT: RNA sequencing (RNA-SEQ) of RRD1 knockout yeast strains with Rapamycin treatment

PROVIDER: PRJNA342496 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR4228420.fastq.gz	Fastqsanger.gz
	SRR4228421.fastq.gz	Fastqsanger.gz
	SRR4228422.fastq.gz	Fastqsanger.gz
	SRR4228423.fastq.gz	Fastqsanger.gz
	SRR4228414.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Saccharomyces cerevisiae

Project description:Transcriptional profiling of Rapamycin treatment in yeast cells lacking the Ptc1 protein phosphatase.

| PRJNA106249 | ENA

MNase-seq Experiments from Saccharomyces cerevisiae

Project description:MNase-seq Experiments from Calorie Restricted and Non-Restricted Yeast from WT, ISW2DEL and ISW2K215R strains

2014-09-15 | GSE53718 | GEO

ncRNA termination in Saccharomyces cerevisiae

Project description:Nuclear depletion of the essential transcription termination factor Nrd1 in Saccharomyces cerevisiae was studied using a combination of RNA-Seq, ChIP-Seq of Pol II and PAR-CLIP of Nrd1. The drug rapamycin induces the formation of a ternary complex between a protein of interest, the drug and the small subunit of the ribosome (both proteins are genetically engineered). The small ribosome subunit is transported out of the nucleus. therefore the protein of interest can be depleted from nucleus upon treatment with rapamycin.

2013-11-14 | E-MTAB-1766 | biostudies-arrayexpress

Saccharomyces cerevisiae

Project description:RNA-seq of total RNA in various anchor away strains with and without the addition of rapamycin.

| PRJNA383312 | ENA

Saccharomyces cerevisiae

Project description:Maf1 chromatin immunodepletion upon rapamycin treatment

| PRJNA93415 | ENA

Saccharomyces cerevisiae

Project description:CRAC of yeast RNA polymerase II in various thermosensitive strains at permissive and non-permissive temperature and anchor-away strains with the addition of rapamycin.

| PRJNA383311 | ENA

RNA-seq data from three Saccharomyces cerevisiae strains with different protein productivity

Project description:The budding yeast Saccharomyces cerevisiae is a popular host to be used to produce recombinant proteins. Here we studied three yeast strains with different productivity using the RNA-seq data to elucidate the mechanisms for improving protein production.

2020-10-26 | GSE147204 | GEO

Saccharomyces cerevisiae S288C

Project description:Global transcriptome changes after nitrogen replenishment following a rapamycin treatment in S288c yeast strain

| PRJNA308443 | ENA

Saccharomyces cerevisiae

Project description:Transcriptome sequencing of three yeast strains

| PRJNA312924 | ENA

Transcription data from Saccharomyces cerevisiae yeast

Project description:Effect of FLO8 or MSS11 deletion and -overexpression on yeast transcript profiles compared to wild type in laboratory yeast strains Σ1278b and S288c.

2011-09-21 | GSE17716 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data