Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptomic analysis of Notch (N) induced [NΔecd] Drosophila larval primary CNS tumours vs N allograft tumours in w1118 host flies

ABSTRACT: Transcriptomic analysis of Notch (N) induced [NΔecd] Drosophila larval primary CNS tumours vs N allograft tumours in w1118 host flies

PROVIDER: PRJNA906978 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR22464164.fastq.gz	Fastqsanger.gz
	SRR22464165.fastq.gz	Fastqsanger.gz
	SRR22464166.fastq.gz	Fastqsanger.gz
	SRR22464167.fastq.gz	Fastqsanger.gz
	SRR22464168.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 9

Similar Datasets

Transcriptomic analysis of Notch (N) induced [NΔecd] Drosophila larval primary CNS tumours vs N allograft tumours in w1118 host flies

Project description:The goal of this project was to compare NGS derived transciptional profiles of primary larval CNS tumours and allograft tumours from two stages (first-T0 and forth-T3) in Drosophila that are induced by overactivation of N pathway in order to decipher if N regulates similar or different sets of genes as primary hypeplasias transition to malignant tumours. The results of this study show that overactivation of N negatively regulates genes related to neuronal differentiation processes genes as N hyperplasias become more malignant and that genes related to stress, metabolsim and immunity are upregulated

2023-05-30 | GSE219067 | GEO

Transcriptomic analysis of HES induced [E(spl)mγ and dpn; DM] Drosophila larval primary CNS tumours vs HES allograft tumours in w1118 host flies

Project description:The goal of this project was to compare NGS derived transciptional profiles of primary larval CNS tumours and allograft tumours from two stages (first-T0 and forth-T3) in Drosophila that are induced by overactivation of two HES genes [E(spl)mγ and dpn;DM] in order to decipher if these two Hes genes control similar or different sets of genes as primary hypeplasias transition to malignant tumours. The results of this study show that overactivation of DM continues to negatively regulate neuronal differentiation genes as the DM hyperplasias become more malignant and that genes related to stress and metabolsim are upregulated

2021-09-01 | GSE179507 | GEO

Transcriptomic analysis of HES induced [E(spl)mγ and dpn DM] Drosophila larval primary CNS tumours vs HES allograft tumours in w1118 host flies

Project description:Transcriptomic analysis of HES induced [E(spl)mγ and dpn DM] Drosophila larval primary CNS tumours vs HES allograft tumours in w1118 host flies

| PRJNA744081 | ENA

Transcription profiling by array of intestinal tissue from Drosophila w1118 and p38c null mutation flies

Project description:We investigated changes in transcriptome of Drosophila female guts in wild-type (w1118) flies and p38c mutant flies (p38c7B1) aged 3-5 days.

2014-09-30 | E-MTAB-2740 | biostudies-arrayexpress

RNA-Seq on SOLiD platform of DrosDel deficiency and w1118 flies

Project description:RNA-Seq reads of DrosDel deficiency (Df/+) and parental strain diploid flies along with spike-in controls was performed on the SOLiD platform. Samples are named in this dataset according to the following sample naming scheme: tissue_genotype shorthand_sex_biological replicate #_platform_technical replicate. We sequenced mRNA from pools of female or male DrosDel and w1118 (parental strain for the Df/+ flies). The same sample was sequenced across two flow cells on the SOLiD platform.

2012-04-03 | E-GEOD-31401 | biostudies-arrayexpress

DNA-Seq of DrosDel deficiency lines and w1118 lines

Project description:DNASeq reads from pools of female or male DrosDel and w1118 (parental strain for the Df/+ flies). Samples are named in this dataset according to the following sample naming scheme: tissue_genotype shorthand_sex_DNASeq_biological replicate #. We sequenced DNA from pools of female or male DrosDel and w1118 (parental strain for the Df/+ flies).

2012-04-03 | E-GEOD-31550 | biostudies-arrayexpress

Allograft

Project description:Microarray data from allograft tumours from CDS and CDV

| PRJEB20834 | ENA

Drosophila DrosDel deficiency and diploid control flies

Project description:GSE31386: Microarray expression analysis of Drosophila DrosDel deficiency lines GSE31401:RNA-Seq on SOLiD platform of DrosDel deficiency and w1118 flies GSE31549: RNA-Seq on Illumnia platform of DrosDel deficiency and w1118 lines GSE31550: DNA-Seq of Drosophila DrosDel deficiency and w1118 lines Refer to individual Series

2012-04-02 | E-GEOD-31407 | biostudies-arrayexpress

DNA-Seq of DrosDel deficiency lines and w1118 lines

2012-04-03 | GSE31550 | GEO

The gene expression changes in darkcd4 apoptosis-deficient mutant flies

Project description:Apoptosis is required not only for proper morphogenesis and tissue size regulation during development, but also for removing damaged or unwanted cells to maintain homeostasis. Apoptosis is mainly executed by evolutionally-conserved signaling process including caspases and its activator, dark. We performed microarray analysis of darkcd4 mutant flies to reveal the changes in gene expression. We found the elevated immune reaction, suggesting that inflammatory response was triggered by necrosis in darkcd4 . We collected total RNA from day 5 adult of darkcd4 mutant flies backcrossed six generations to w1118. w1118 was used as control. N=4 for each sample.

2014-06-26 | E-GEOD-47853 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data