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...dine (dU) in DNA can result from deamination of cytosine and dUMP misincorporation. The easy singl...
...ent a new concept of “base substitution” for accurate single-nucleotide resolution profiling of dU. The method termed AI-Seq ...
ORGANISM(S): Homo sapiens 
2021-03-22 | GSE142071 | GEO
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Productive B cell responses are critical to protect a host from infection. The spleen and lymph nodes are populated by resting follicular B cells, which can enter germinal centers upon antigen encounter. Once in the germinal center, B cells migrate between the dark and light zones, where they undergo...
ORGANISM(S): Mus Musculus (mouse) 
2020-04-06 | PXD015524 | Pride
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Microbe-associated molecular pattern (MAMP)-triggered immunity (MTI) is the first layer of molecular defense encountered by pathogens when they attempt to infect plants. MTI is dependent on cell surface pattern-recognition receptors (PRR) which act upstream of mitogen-activated protein kinase (MAPK) pathways. Genetic screening and mutant knock-out lines have largely contributed to our knowledge of MTI. However, genetic screening is confined to phenotype-causing mutations and scarcely enables the discovery of redundantly-acting proteins. We sought to discover protein components that contribute in M...
...ns that were absent from Col-0 plants when elicited with chitosan indicating that they also perceive chitosan. Detailed analysis of the identified proteins revealed a nuclear accumulation of transcriptional regulators and transcription factors, DNA-modifying enzymes, RNA-binding proteins and ribosomal proteins. No novel MAPKs were found although Receptor for activated C kinase 1, a scaffold protein involved in defense, and a nucleotide binding leucine-rich repeat protein, implicated in resistance to Leptosphaeria maculans, were discovered in the nucleus of chitosan-treated plants and absent from water-treated control plants.
ORGANISM(S): Arabidopsis Thaliana (mouse-ear Cress) 
2018-10-26 | PXD003821 | Pride
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Colorectal cancer (CRC) is a leading cause of cancer-related death. Diagnosis at an early stage can greatly improve the patient outcome. Therefore, developing sensitive and specific non-invasive screening and diagnostic methods has a tremendous potential to combat the disease.
ORGANISM(S): Homo Sapiens (human) 
2024-05-24 | PXD042639 | Pride
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In vitro production (IVP) has been shown to affect embryonic gene expression and often result in large offspring s...
...o maturation, fertilization and in vitro culture (IVD); and 3) in vivo maturation, fertilization and development (AI). To conduct expression profiling, total RNA was isolated from individual embryos, linearly amplified and hybridized to a custom bovine cDNA microarray conta...
ORGANISM(S): Bos taurus 
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Colorectal cancer (CRC) is a leading cause of cancer-related death. Diagnosis at an early stage can greatly improve the patient outcome. Therefore, developing sensitive and specific non-invasive screening and diagnostic methods has a tremendous potential to combat the disease.
ORGANISM(S): Homo Sapiens (human) 
2024-05-24 | PXD042652 | Pride
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Highly variable outcomes are observed in patients with estrogen receptor positive (ER+) breast cancer who undergo preoperative estrogen deprivation therapy with aromatase inhibitors (AI). In this study, 46 tumor and normal genomes and 31 exomes of participants selected from two clinical trials of n...

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AI versus IVF-ET & AI versus SCNT
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