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E-MTAB-4793

ABSTRACT: Transcription profiling by high throughput sequencing of flower buds from two tomato nearly isogenic lines that differ for the allele at fw3.2 in Yellow Stuffer background

PROVIDER: E-MTAB-4793 | ExpressionAtlas | 2019-05-14

REPOSITORIES: ExpressionAtlas

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			Action	DRS
	E-MTAB-4793-analysis-methods.tsv	Tabular
	E-MTAB-4793-analytics.tsv	Tabular
	E-MTAB-4793-analytics.tsv.undecorated	Tabular
	E-MTAB-4793-analytics.tsv.undecorated.unrounded	Tabular
	E-MTAB-4793-analytics.tsv.unrounded	Tabular

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Identification of heat induced proteins in young tomato flower buds

Project description:Tomato flowering and fruit set require an optimal temperature of 25/22 ± 2˚C (day/night). When the air temperature reaches to above the optimal range (higher than 30/26˚C; day/night), only a small number of flower buds would develop into mature flowers and produce a reduced number of pollen. This project used the iodoTMT proteomics analysis method to identify heat-induced proteomes in these tomato flower buds.

2022-03-03 | PXD012160 | Pride

E-MTAB-4792

Project description:Transcription profiling by high throughput sequencing of two tomato nearly isogenic lines that differ for the allele at fw3.2 in Yellow Stuffer background

2019-05-14 | E-MTAB-4792 | ExpressionAtlas

Solanum lycopersicum Transcriptome or Gene expression

Project description:Lines nearly isogenic for fw3.2 in the cultivated background Solanum lycopersicum c.v. Yellow Stuffer were grown in the greenhouse in a completely randomized design. fw3.2 (ys) and fw3.2 (wt) are NILs carrying cultivated and wild alleles for fw3.2 locus. Young flower buds were harvested. For each sample, three replicates were used. RNA was extracted using Trizol and Stand-specific libraries were prepared from total RNA and sequences of 51 bp were generated on an Illumina HiSeq2000.

2013-07-27 | E-MTAB-4793 | biostudies-arrayexpress

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Project description:The tomato mutant unfinished flower development (ufd) has blocked the growth of floral buds at an early stage of development. To find transcriptional changes promoted by the ufd mutation, gene expression differences between wild type and the mutant was analyzed in flowering shoot apices using TOM2 microarray (that is a custom two-colour microarray where one channel was used as a common reference).

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