Proteomics

Dataset Information

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SHMT2 controls Burkitt lymphoma cell survival by maintaining an oncogenic TCF3 transcriptional program

ABSTRACT: In this study, the human Burkitt’s Lymphoma cell line BL60 has been analysed via proteomic and phosphoproteomic analysis for effect of a knock down of the serine hydroxymethyltransferase 2 (shSHMT2) compared to a control construct (shGL2). Concerning the phosphoproteome, these results have been compared to an analysis of a knock down of CD79a (shCD79a) in these cells.

INSTRUMENT(S): Q Exactive HF

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): B Cell, Burkitt Lymphoma Cell Line

DISEASE(S): Burkitt Lymphoma

SUBMITTER: Anne Wilke  

LAB HEAD: Thomas Oellerich

PROVIDER: PXD018961 | Pride | 2023-03-10

REPOSITORIES: Pride

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Dataset's files

Source:
Action DRS
MaxQuant_output_gProteome.zip Other
MaxQuant_output_pYome.zip Other
TO_AC-Koehler_170117_010217_Tube3_L3_1.raw Raw
TO_AC-Koehler_170117_010217_Tube3_L3_10.raw Raw
TO_AC-Koehler_170117_010217_Tube3_L3_11.raw Raw
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Publications

SHMT2 inhibition disrupts the TCF3 transcriptional survival program in Burkitt lymphoma.

Wilke Anne C AC   Doebele Carmen C   Zindel Alena A   Lee Kwang Seok KS   Rieke Sara A SA   Ceribelli Michele M   Comoglio Federico F   Phelan James D JD   Wang James Q JQ   Pikman Yana Y   Jahn Dominique D   Häupl Björn B   Schneider Constanze C   Scheich Sebastian S   Tosto Frances A FA   Bohnenberger Hanibal H   Stauder Philipp P   Schnütgen Frank F   Slabicki Mikolaj M   Coulibaly Zana A ZA   Wolf Sebastian S   Bojarczuk Kamil K   Chapuy Björn B   Brandts Christian H CH   Stroebel Philipp P   Lewis Caroline A CA   Engelke Michael M   Xu Xincheng X   Kim Hahn H   Dang Thanh Hung TH   Schmitz Roland R   Hodson Daniel J DJ   Stegmaier Kimberly K   Urlaub Henning H   Serve Hubert H   Schmitt Clemens A CA   Kreuz Fernando F   Knittel Gero G   Rabinowitz Joshua D JD   Reinhardt Hans Christian HC   Vander Heiden Matthew G MG   Thomas Craig C   Staudt Louis M LM   Zenz Thorsten T   Oellerich Thomas T  

Blood 20220101 4

Burkitt lymphoma (BL) is an aggressive lymphoma type that is currently treated by intensive chemoimmunotherapy. Despite the favorable clinical outcome for most patients with BL, chemotherapy-related toxicity and disease relapse remain major clinical challenges, emphasizing the need for innovative therapies. Using genome-scale CRISPR-Cas9 screens, we identified B-cell receptor (BCR) signaling, specific transcriptional regulators, and one-carbon metabolism as vulnerabilities in BL. We focused on s  ...[more]

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