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Data independent acquisition for Arabidopsis

ABSTRACT: To comprehensively assess the influence of PRPS10 haploinsufficiency on chloroplast protein accumulation, we performed DIA-MS. Total proteins were extracted from 3 DAG seedlings of WT, bpg2-2, prps10-1/+, bpg2 prps10/+ grown under normal growth conditions.

INSTRUMENT(S): Orbitrap Fusion Lumos

ORGANISM(S): Arabidopsis Thaliana (mouse-ear Cress)

TISSUE(S): Whole Body

SUBMITTER: Pengcheng Li

LAB HEAD: Pengcheng Li

PROVIDER: PXD027861 | Pride | 2024-08-09

REPOSITORIES: Pride

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			Action	DRS
	20210325_150211_21P01700001_Report.xls	Xls
	DDA_Rawdata_1.tar.gz	Other
	DDA_Rawdata_2.tar.gz	Other
	DDA_Rawdata_3.tar.gz	Other
	DIA_Rawdata_1.tar.gz	Other

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Publications

The uS10c-BPG2 module mediates ribosomal RNA processing in chloroplast nucleoids.

Sun Xueping X Singla-Rastogi Meenu M Wang Jingwen J Zhao Chuanzhi C Wang Xingjun X Li Pengcheng P

Nucleic acids research 20240701 13

In plant chloroplasts, certain ribosomal proteins (RPs) and ribosome biogenesis factors (RBFs) are present in nucleoids, implying an association between nucleoids and ribosome biogenesis. In Arabidopsis, the YqeH-type GTPase Brassinazole-Insensitive Pale Green2 (BPG2) is a chloroplast nucleoid-associated RBF. Here, we investigated the relationship between nucleoids and BPG2-involved ribosome biogenesis steps by exploring how BPG2 targets ribosomes. Our findings demonstrate that BPG2 interacts wi ...[more]

PMID: 38686791

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